| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 6XNB-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 7 | 2 | ✔ |
| 6XNB-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 7 | 2 | ✔ |
| 6XNY-MG-1 | MG | Mg²⁺ | C1D1E1 | ASP.DC.GLU. | ASP.DC.GLU. | ✘ | 3 | 3 | 2 | ✔ |
| 6XNY-MG-2 | MG | Mg²⁺ | C1D1E1 | ASP.DC.GLU. | ASP.DC.GLU. | ✘ | 3 | 3 | 2 | ✔ |
| 6XNX-MG-1 | MG | Mg²⁺ | C1D1E1 | ASP.DC.GLU. | ASP.DC.GLU. | ✘ | 3 | 3 | 2 | ✔ |
| 6XNX-MG-2 | MG | Mg²⁺ | C1D1E1 | ASP.DC.GLU. | ASP.DC.GLU. | ✘ | 3 | 3 | 2 | ✔ |
| 6Y1C-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6Y1C-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6Y15-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6Y15-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6X70-MG-1 | MG | Mg²⁺ | A1D1V1 | ASP.DA.VAL. | ASP.DA.HOH.VAL. | ✘ | 3 | 5 | 2 | ✘ |
| 6WUQ-MG-1 | MG | Mg²⁺ | G1L1P1R1T1 | ARG.GLY.LEU.PRO.THR. | ARG.GLY.LEU.PRO.THR. | ✔ | 5 | 5 | 2 | ✔ |
| 6WUQ-MG-2 | MG | Mg²⁺ | E1G1L1P1T1 | GLU.GLY.LEU.PRO.THR. | GLU.GLY.LEU.PRO.THR. | ✔ | 5 | 5 | 2 | ✔ |
| 6X71-MG-1 | MG | Mg²⁺ | C1D2F1 | ASP.DC.PHE. | ASP.DC.DCP.PHE.POP. | ✘ | 4 | 6 | 2 | ✔ |
| 6X71-MG-2 | MG | Mg²⁺ | A1D1L1 | ASP.DA.LEU. | HOH.POP. | ✘ | 3 | 3 | 2 | ✘ |
| 6X74-MG-1 | MG | Mg²⁺ | A1D1L1V1 | ASP.DA.LEU.VAL. | ASP.DA.HOH.LEU.VAL. | ✘ | 4 | 5 | 2 | ✔ |
| 4ZP1-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 4ZP1-NI-2 | NI | Ni²⁺ | H3 | HIS. | HIS. | ✔ | 3 | 3 | 2 | ✔ |
| 5K6R-K-1 | K | K⁺ | M2Q2 | GLN.MET. | GLN.MET. | ✔ | 4 | 4 | 2 | ✔ |
| 5K6T-K-1 | K | K⁺ | M2Q2 | GLN.MET. | GLN.MET. | ✔ | 4 | 4 | 2 | ✔ |