| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 2OX6-MG-3 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✘ |
| 1NC7-MG-3 | MG | Mg²⁺ | T4 | THR. | HOH. | ✔ | 4 | 2 | 4 | ✔ |
| 2CG4-MG-1 | MG | Mg²⁺ | D2 | ASP. | ASP. | ✔ | 2 | 2 | 2 | ✔ |
| 2CG4-MG-2 | MG | Mg²⁺ | D2 | ASP. | ASP. | ✔ | 2 | 2 | 2 | ✘ |
| 2CG4-MG-3 | MG | Mg²⁺ | D2 | ASP. | ASP. | ✔ | 2 | 2 | 2 | ✘ |
| 2CG4-MG-4 | MG | Mg²⁺ | D2 | ASP. | ASP. | ✔ | 2 | 2 | 2 | ✘ |
| 3N6Q-MG-2 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✘ |
| 3N6Q-MG-6 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✘ |
| 3N6Q-MG-7 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✘ |
| 3N6Q-MG-8 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✘ |
| 3N6Q-MG-9 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✘ |
| 3NGO-MG-1 | MG | Mg²⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 3NL3-MG-2 | MG | Mg²⁺ | D1T1 | ASP.THR. | ASP.THR. | ✔ | 2 | 2 | 2 | ✔ |
| 3NRT-MG-1 | MG | Mg²⁺ | D2 | ASP. | ASP. | ✔ | 2 | 2 | 2 | ✔ |
| 3T80-MG-4 | MG | Mg²⁺ | D1T1 | ASP.THR. | ASP.THR. | ✔ | 2 | 2 | 2 | ✘ |
| 3L4P-CA-1 | CA | Ca²⁺ | D2 | ASP. | ASP. | ✔ | 2 | 2 | 2 | ✔ |
| 3LD0-MG-2 | MG | Mg²⁺ | E3 | GLU. | GLU.HOH. | ✔ | 3 | 2 | 3 | ✘ |
| 3G1B-MG-2 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✔ |
| 3CVJ-MG-1 | MG | Mg²⁺ | E2 | GLU. | GLU. | ✔ | 2 | 2 | 2 | ✔ |
| 2W8K-MG-1 | MG | Mg²⁺ | D1X1 | ASP.DOC. | ASP.DOC. | ✘ | 2 | 2 | 2 | ✘ |