| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 5HLK-NA-1 | NA | Na⁺ | T2 | DT.THR. | DT.HOH.THR. | ✘ | 2 | 3 | 2 | ✔ |
| 5HLK-NA-2 | NA | Na⁺ | T2 | DT.THR. | DT.HOH.THR. | ✘ | 2 | 4 | 2 | ✘ |
| 5LDB-MG-1 | MG | Mg²⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 3 | 2 | ✔ |
| 2DP7-K-1 | K | K⁺ | T2 | DT. | DT.HOH. | ✔ | 2 | 5 | 2 | ✘ |
| 4R82-MG-1 | MG | Mg²⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 4 | 2 | ✔ |
| 3EDL-MG-1 | MG | Mg²⁺ | T2 | THR. | ANP.HOH.THR. | ✔ | 2 | 7 | 2 | ✔ |
| 1G75-K-1 | K | K⁺ | T2 | DT. | DT.HOH. | ✔ | 2 | 5 | 2 | ✔ |
| 5J1S-MG-1 | MG | Mg²⁺ | T2 | THR. | HOH.THR. | ✘ | 2 | 5 | 2 | ✔ |
| 2FI4-CA-1 | CA | Ca²⁺ | T2 | THR. | HOH. | ✔ | 2 | 2 | 2 | ✔ |
| 2FI5-CA-1 | CA | Ca²⁺ | T2 | THR. | THR. | ✔ | 2 | 2 | 2 | ✘ |
| 2FI5-CA-2 | CA | Ca²⁺ | T2 | THR. | THR. | ✔ | 2 | 2 | 2 | ✘ |
| 4D7A-NA-1 | NA | Na⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 6 | 2 | ✔ |
| 4D79-NA-1 | NA | Na⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 6 | 2 | ✔ |
| 2FTM-CA-1 | CA | Ca²⁺ | T2 | THR. | THR. | ✔ | 2 | 2 | 2 | ✘ |
| 2FTM-CA-2 | CA | Ca²⁺ | T2 | THR. | THR. | ✔ | 2 | 2 | 2 | ✘ |
| 2FTL-CA-1 | CA | Ca²⁺ | T2 | THR. | HOH. | ✔ | 2 | 2 | 2 | ✘ |
| 5MIW-NA-2 | NA | Na⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 4 | 2 | ✔ |
| 5MIW-NA-3 | NA | Na⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 4 | 2 | ✘ |
| 5MIW-NA-5 | NA | Na⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 4 | 2 | ✘ |
| 6RK1-NA-1 | NA | Na⁺ | T2 | THR. | HOH.THR. | ✔ | 2 | 4 | 2 | ✔ |