| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 6H07-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6H07-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6HLF-MN-1 | MN | Mn²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6HLF-MN-2 | MN | Mn²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 7A2B-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 7A2B-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6XNB-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 7 | 2 | ✔ |
| 6XNB-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 7 | 2 | ✔ |
| 6Y1C-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6Y1C-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6Y15-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 6Y15-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 1NXQ-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 1NXQ-MG-2 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 5VEQ-CA-1 | CA | Ca²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 7 | 2 | ✔ |
| 5VEP-CA-1 | CA | Ca²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 5 | 2 | ✔ |
| 5VEP-CA-2 | CA | Ca²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 5 | 2 | ✘ |
| 5VER-CA-1 | CA | Ca²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 5VER-CA-2 | CA | Ca²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✘ |
| 7VDO-MG-1 | MG | Mg²⁺ | Q2 | GLN. | GLN.HOH. | ✔ | 2 | 6 | 2 | ✔ |