| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 4ZP1-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 4MTS-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 4MTT-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 4L3K-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 6A6F-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 3HG9-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 4KSF-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 4KSF-NI-2 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 4H73-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 6DK8-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 6DK8-NI-2 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 6J6F-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 2C7V-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 2C7V-NI-2 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 2CAJ-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |
| 2CAJ-NI-2 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 2CAJ-NI-3 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 2CAJ-NI-4 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✘ |
| 7R3S-NI-1 | NI | Ni²⁺ | H2 | HIS. | HIS. | ✔ | 2 | 2 | 2 | ✔ |