| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 2NZM-CA-1 | CA | Ca²⁺ | D3X1 | ADA.ASP. | ADA.ASP.HOH. | ✘ | 4 | 6 | 2 | ✔ |
| 2O1D-CA-1 | CA | Ca²⁺ | D3X1 | ADA.ASP. | ADA.ASP.HOH. | ✘ | 4 | 6 | 2 | ✔ |
| 2O0V-CA-1 | CA | Ca²⁺ | D3X1 | ADA.ASP. | ADA.ASP.HOH. | ✘ | 4 | 6 | 2 | ✔ |
| 2O17-CA-1 | CA | Ca²⁺ | D3X1 | ADA.ASP. | ADA.ASP.HOH. | ✘ | 4 | 6 | 2 | ✔ |
| 3DED-CA-1 | CA | Ca²⁺ | D3X1 | ASP.MSE. | ASP.HOH.MSE. | ✔ | 4 | 7 | 2 | ✔ |
| 3DED-CA-3 | CA | Ca²⁺ | D3X1 | ASP.MSE. | ASP.HOH.MSE. | ✔ | 4 | 7 | 2 | ✘ |
| 5V1F-CA-1 | CA | Ca²⁺ | D3X1 | 8OG.ASP. | 8OG.ASP.DCP. | ✘ | 4 | 5 | 2 | ✔ |