| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 2ESL-CA-1 | CA | Ca²⁺ | D3 | ASP. | ASP. | ✔ | 3 | 3 | 3 | ✔ |
| 2ESL-CA-2 | CA | Ca²⁺ | D3 | ASP. | ASP. | ✔ | 3 | 3 | 3 | ✘ |
| 6IM0-CA-3 | CA | Ca²⁺ | D3 | ASP. | ASP. | ✔ | 3 | 3 | 2 | ✔ |
| 3INM-CA-1 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 6 | 2 | ✔ |
| 3INM-CA-2 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 6 | 2 | ✔ |
| 5I96-CA-2 | CA | Ca²⁺ | D3 | ASP. | ASP.HOH. | ✔ | 3 | 6 | 2 | ✔ |
| 6VFZ-CA-1 | CA | Ca²⁺ | D3 | ASP. | ASP.HOH. | ✔ | 3 | 6 | 2 | ✘ |
| 6VFZ-CA-2 | CA | Ca²⁺ | D3 | ASP. | ASP.HOH. | ✔ | 3 | 6 | 2 | ✘ |
| 2QFX-CA-2 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP. | ✔ | 3 | 4 | 2 | ✘ |
| 2MPR-CA-1 | CA | Ca²⁺ | D3 | ASP. | ASP. | ✔ | 3 | 3 | 3 | ✘ |
| 2ID3-CA-2 | CA | Ca²⁺ | D3 | ASP. | ASP.HOH. | ✔ | 3 | 6 | 2 | ✔ |
| 2ID3-CA-3 | CA | Ca²⁺ | D3 | ASP. | ASP.HOH. | ✔ | 3 | 6 | 2 | ✘ |
| 4L03-CA-1 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 6 | 2 | ✔ |
| 4L03-CA-2 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 6 | 2 | ✘ |
| 4L04-CA-1 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP. | ✔ | 3 | 4 | 2 | ✘ |
| 4L04-CA-2 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 5 | 2 | ✘ |
| 4L06-CA-1 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 5 | 2 | ✘ |
| 4L06-CA-2 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP. | ✔ | 3 | 4 | 2 | ✘ |
| 4KZO-CA-1 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 6 | 2 | ✘ |
| 4KZO-CA-2 | CA | Ca²⁺ | D3 | ASP. | AKG.ASP.HOH. | ✔ | 3 | 6 | 2 | ✘ |