| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 6IPF-MN-1 | MN | Mn²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH.PPV. | ✘ | 3 | 5 | 2 | ✘ |
| 6IPD-MN-1 | MN | Mn²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH.OXD. | ✘ | 3 | 5 | 2 | ✔ |
| 2ASL-CA-1 | CA | Ca²⁺ | D2X1 | ASP.DOC. | HOH. | ✘ | 3 | 6 | 2 | ✔ |
| 1BSU-CA-1 | CA | Ca²⁺ | D2X1 | ASP.DI. | ASP.DI.HOH. | ✘ | 3 | 6 | 2 | ✔ |
| 1BSU-CA-2 | CA | Ca²⁺ | D2X1 | ASP.DI. | ASP.DI.HOH. | ✘ | 3 | 6 | 2 | ✔ |
| 6S21-CA-1 | CA | Ca²⁺ | D2X1 | ASG.ASP. | ASG.ASP. | ✘ | 3 | 3 | 2 | ✔ |
| 6O78-MN-1 | MN | Mn²⁺ | D2X1 | ASP.ATP. | ASP.ATP. | ✘ | 3 | 3 | 2 | ✔ |
| 6O75-MN-1 | MN | Mn²⁺ | D2X1 | ASP.ATP. | ASP.ATP. | ✘ | 3 | 3 | 2 | ✔ |
| 8BE0-MG-1 | MG | Mg²⁺ | D2X1 | ASP.K1F. | ASP.K1F. | ✘ | 3 | 3 | 2 | ✔ |
| 6VF1-MG-1 | MG | Mg²⁺ | D2X1 | 8GM.ASP. | 8GM.ASP.GOA.HOH. | ✘ | 3 | 6 | 2 | ✘ |
| 7KTE-MG-2 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8DG.8OG.ASP.HOH.PPV. | ✘ | 3 | 6 | 2 | ✔ |
| 7KTG-MG-1 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.GOA.HOH. | ✘ | 3 | 5 | 2 | ✔ |
| 7KTF-MG-1 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH.PPV. | ✘ | 3 | 5 | 2 | ✘ |
| 7KTN-MG-1 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH. | ✘ | 3 | 5 | 2 | ✔ |
| 7KTH-MG-1 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.GOA.HOH. | ✘ | 3 | 5 | 2 | ✘ |
| 7KT7-MG-2 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8DG.8OG.ASP.HOH.PPV. | ✘ | 3 | 6 | 2 | ✔ |
| 7KT8-MG-1 | MG | Mg²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH.PPV. | ✘ | 3 | 5 | 2 | ✘ |
| 7M4L-MN-1 | MN | Mn²⁺ | D2X1 | ASP.YQS. | ASP.HOH.PPV.YQS. | ✘ | 3 | 5 | 2 | ✔ |
| 7KTD-MN-2 | MN | Mn²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH.PPV. | ✘ | 3 | 5 | 2 | ✘ |
| 7KTC-MN-2 | MN | Mn²⁺ | D2X1 | 8OG.ASP. | 8OG.ASP.HOH.PPV. | ✘ | 3 | 5 | 2 | ✘ |