| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 5IIL-NA-2 | NA | Na⁺ | D2T1 | ASP.DT. | ASP.CIT.DT.HOH. | ✘ | 3 | 5 | 2 | ✔ |
| 5TYZ-MN-1 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.GOA.HOH. | ✘ | 3 | 5 | 2 | ✔ |
| 5TYV-MN-1 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV. | ✘ | 3 | 5 | 2 | ✔ |
| 5TYY-MN-1 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV. | ✘ | 3 | 5 | 2 | ✔ |
| 5TYX-MN-1 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV. | ✘ | 3 | 5 | 2 | ✔ |
| 2B0D-CA-1 | CA | Ca²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH. | ✘ | 3 | 4 | 2 | ✔ |
| 6OZH-CA-1 | CA | Ca²⁺ | D2T1 | ASP.DT. | ASP.DT. | ✘ | 3 | 3 | 2 | ✔ |
| 6OZH-CA-2 | CA | Ca²⁺ | D2T1 | ASP.DT. | ASP.DT. | ✘ | 3 | 3 | 2 | ✔ |
| 1HUZ-CR-1 | CR | Cr³⁺ | D2T1 | ASP.DT. | ASP.DT.MDN. | ✘ | 3 | 4 | 2 | ✔ |
| 4KPY-MN-2 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH. | ✘ | 3 | 5 | 2 | ✔ |
| 4N76-MN-2 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT. | ✘ | 3 | 3 | 2 | ✔ |
| 5HRE-MN-1 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.FMT.HOH. | ✘ | 3 | 6 | 2 | ✔ |
| 5HRE-MN-2 | MN | Mn²⁺ | D2T1 | ASP.DT. | ASP.DT.FMT.HOH. | ✘ | 3 | 6 | 2 | ✘ |
| 8EA4-MG-1 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT. | ✘ | 3 | 3 | 2 | ✘ |
| 8EA3-MG-1 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT. | ✘ | 3 | 3 | 2 | ✔ |
| 7M44-MG-1 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV.TTP. | ✘ | 3 | 6 | 2 | ✔ |
| 7M47-MG-1 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV. | ✘ | 3 | 5 | 2 | ✔ |
| 7M46-MG-1 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV. | ✘ | 3 | 5 | 2 | ✔ |
| 7M48-MG-1 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.OXL. | ✘ | 3 | 5 | 2 | ✔ |
| 7M0C-MG-2 | MG | Mg²⁺ | D2T1 | ASP.DT. | ASP.DT.HOH.PPV. | ✘ | 3 | 5 | 2 | ✔ |