| Id | Element | Ion | Binding family | Amino acids or nucleotide residues names | All bound residues | Is homomer | Number of bound amino acids or nucleotide residues | Number of all bound residues | Number of coordinating chains | Representative |
|---|---|---|---|---|---|---|---|---|---|---|
| 3NGO-MG-1 | MG | Mg²⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 3V9S-MG-1 | MG | Mg²⁺ | A1D1 | ASP.DA. | ASP.DA.HOH. | ✘ | 2 | 5 | 2 | ✔ |
| 2XCA-MG-1 | MG | Mg²⁺ | A1D1 | ASP.DA. | ASP.DA.HOH. | ✘ | 2 | 6 | 2 | ✔ |
| 4CN2-MG-2 | MG | Mg²⁺ | A1D1 | ASP.DA. | ASP.DA.HOH. | ✘ | 2 | 3 | 2 | ✔ |
| 4O3R-MG-1 | MG | Mg²⁺ | A1D1 | ASP.DA. | 0KX.ASP.DA.HOH. | ✘ | 2 | 4 | 2 | ✔ |
| 5IYB-MG-1 | MG | Mg²⁺ | A1D1 | ALA.ASP. | ALA.ASP. | ✘ | 2 | 2 | 2 | ✔ |
| 6DBI-CA-1 | CA | Ca²⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✘ |
| 2GIJ-CA-2 | CA | Ca²⁺ | A1D1 | ASP.DA. | ASP.DA.HOH. | ✘ | 2 | 4 | 2 | ✔ |
| 8ICK-MN-1 | MN | Mn²⁺ | A1D1 | ASP.DA. | ASP.DA.DTP. | ✘ | 2 | 3 | 2 | ✔ |
| 8ICR-MN-1 | MN | Mn²⁺ | A1D1 | ASP.DA. | ASP.DA.DTP. | ✘ | 2 | 3 | 2 | ✘ |
| 2I0F-CA-1 | CA | Ca²⁺ | A1D1 | ALA.ASP. | ALA.ASP. | ✔ | 2 | 2 | 2 | ✔ |
| 6PQX-CA-4 | CA | Ca²⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQW-FE-1 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQW-FE-3 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQX-FE-1 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQX-FE-3 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQY-FE-1 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQY-FE-3 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQZ-FE-1 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |
| 4QQZ-FE-3 | FE | Fe³⁺ | A1D1 | ASP.DA. | ASP.DA. | ✘ | 2 | 2 | 2 | ✔ |